skills/claude-scientific-skills
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Timothy Kassis
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scientific-databases/geo-database/SKILL.md
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@@ -7,7 +7,11 @@ description: "Access NCBI GEO for gene expression/genomics data. Search/download
## Overview
This skill provides tools and guidance for working with the Gene Expression Omnibus (GEO), NCBI's public repository for high-throughput gene expression and functional genomics data. GEO contains over 264,000 studies with more than 8 million samples from both array-based and sequence-based experiments. Use this skill to search for gene expression datasets, retrieve experimental data, download raw and processed files, query expression profiles, and integrate GEO data into computational analysis workflows.
The Gene Expression Omnibus (GEO) is NCBI's public repository for high-throughput gene expression and functional genomics data. GEO contains over 264,000 studies with more than 8 million samples from both array-based and sequence-based experiments.
## When to Use This Skill
This skill should be used when searching for gene expression datasets, retrieving experimental data, downloading raw and processed files, querying expression profiles, or integrating GEO data into computational analysis workflows.
## Core Capabilities