skills/claude-scientific-skills
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Timothy Kassis
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scientific-databases/metabolomics-workbench-database/SKILL.md
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@@ -9,7 +9,9 @@ description: "Access NIH Metabolomics Workbench via REST API (4,200+ studies). Q
The Metabolomics Workbench is a comprehensive NIH Common Fund-sponsored platform hosted at UCSD that serves as the primary repository for metabolomics research data. It provides programmatic access to over 4,200 processed studies (3,790+ publicly available), standardized metabolite nomenclature through RefMet, and powerful search capabilities across multiple analytical platforms (GC-MS, LC-MS, NMR).
This skill enables efficient interaction with the Metabolomics Workbench REST API to query metabolite structures, access study data, standardize nomenclature, perform mass spectrometry searches, and retrieve gene/protein-metabolite associations.
## When to Use This Skill
This skill should be used when querying metabolite structures, accessing study data, standardizing nomenclature, performing mass spectrometry searches, or retrieving gene/protein-metabolite associations through the Metabolomics Workbench REST API.
## Core Capabilities