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@@ -7,15 +7,19 @@ description: "Query STRING API for protein-protein interactions (59M proteins, 2
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## Overview
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STRING (Search Tool for the Retrieval of Interacting Genes/Proteins) is a comprehensive database of known and predicted protein-protein interactions. This skill enables interaction with STRING's REST API to query protein networks, analyze functional enrichments, and discover interaction partners across 5000+ organisms.
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STRING is a comprehensive database of known and predicted protein-protein interactions covering 59M proteins and 20B+ interactions across 5000+ organisms. Query interaction networks, perform functional enrichment, discover partners via REST API for systems biology and pathway analysis.
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**Database Statistics:**
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- Coverage: 5000+ genomes
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- Proteins: ~59.3 million
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- Interactions: 20+ billion
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- Evidence types: Experimental data, computational prediction, text-mining, pathway databases
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## When to Use This Skill
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**Data Sources:** Integrates over 40 sources including experimental repositories, pathway databases, automated text-mining, and computational predictions.
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This skill should be used when:
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- Retrieving protein-protein interaction networks for single or multiple proteins
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- Performing functional enrichment analysis (GO, KEGG, Pfam) on protein lists
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- Discovering interaction partners and expanding protein networks
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- Testing if proteins form significantly enriched functional modules
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- Generating network visualizations with evidence-based coloring
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- Analyzing homology and protein family relationships
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- Conducting cross-species protein interaction comparisons
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- Identifying hub proteins and network connectivity patterns
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## Quick Start
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