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## Multi-omics & AI Agent Frameworks
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- **BIOMNI** - Autonomous biomedical AI agent framework from Stanford SNAP lab for executing complex research tasks across genomics, drug discovery, molecular biology, and clinical analysis. Combines LLM reasoning with code execution and ~11GB of integrated biomedical databases (Ensembl, NCBI Gene, UniProt, PDB, AlphaFold, ClinVar, OMIM, HPO, PubMed, KEGG, Reactome, GO). Supports multiple LLM providers (Claude, GPT-4, Gemini, Groq, Bedrock). Includes A1 agent class for autonomous task decomposition, BiomniEval1 benchmark framework, and MCP server integration. Use cases: CRISPR screening design, single-cell RNA-seq analysis, ADMET prediction, GWAS interpretation, rare disease diagnosis, protein structure analysis, literature synthesis, and multi-omics integration
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## Scientific Communication & Publishing
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- **Paper-2-Web** - Autonomous pipeline for transforming academic papers into multiple promotional formats using the Paper2All system. Converts LaTeX or PDF papers into: (1) Paper2Web - interactive, layout-aware academic homepages with responsive design, interactive figures, and mobile support; (2) Paper2Video - professional presentation videos with slides, narration, cursor movements, and optional talking-head generation using Hallo2; (3) Paper2Poster - print-ready conference posters with custom dimensions, professional layouts, and institution branding. Supports GPT-4/GPT-4.1 models, batch processing, QR code generation, multi-language content, and quality assessment metrics. Use cases: conference materials, video abstracts, preprint enhancement, research promotion, poster sessions, and academic website creation
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