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Timothy Kassis
2025-10-19 18:09:12 -07:00
parent 4080bf907b
commit 0bdbd2b7e8
5 changed files with 947 additions and 2 deletions

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@@ -9,6 +9,7 @@ A comprehensive collection of ready-to-use scientific skills for Claude, curated
- **AlphaFold DB** - AI-predicted protein structure database with 200M+ predictions, confidence metrics (pLDDT, PAE), and Google Cloud bulk access
- **ChEMBL** - Bioactive molecule database with drug-like properties (2M+ compounds, 19M+ activities, 13K+ targets)
- **GEO (Gene Expression Omnibus)** - High-throughput gene expression and functional genomics data repository (264K+ studies, 8M+ samples) with microarray, RNA-seq, and expression profile access
- **KEGG** - Kyoto Encyclopedia of Genes and Genomes for biological pathway analysis, gene-to-pathway mapping, compound searches, and molecular interaction networks (pathway enrichment, metabolic pathways, gene annotations, drug-drug interactions, ID conversion)
- **NCBI Gene** - Work with NCBI Gene database to search, retrieve, and analyze gene information including nomenclature, sequences, variations, phenotypes, and pathways using E-utilities and Datasets API
- **Protein Data Bank (PDB)** - Access 3D structural data of proteins, nucleic acids, and biological macromolecules (200K+ structures) with search, retrieval, and analysis capabilities
- **PubChem** - Access chemical compound data from the world's largest free chemical database (110M+ compounds, 270M+ bioactivities)
@@ -107,7 +108,6 @@ You can use Anthropic's pre-built skills, and upload custom skills, via the Clau
### Scientific Databases
- **UniProt** - Protein sequence and functional information database
- **KEGG** - Kyoto Encyclopedia of Genes and Genomes for pathways and metabolism
- **COSMIC** - Catalogue of Somatic Mutations in Cancer
- **ClinVar** - Clinical significance of genomic variants
- **STRING** - Protein-protein interaction networks