skills/claude-scientific-skills
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Add support for Cirq: library for writing, manipulating, and optimizing quantum circuits, and then running them on quantum computers and quantum simulators.

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Timothy Kassis
2025-11-30 08:02:58 -05:00
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# Claude Scientific Skills
[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](LICENSE.md)
[![Skills](https://img.shields.io/badge/Skills-124-brightgreen.svg)](#whats-included)
[![Skills](https://img.shields.io/badge/Skills-125-brightgreen.svg)](#whats-included)
A comprehensive collection of **124+ ready-to-use scientific skills** for Claude, created by the K-Dense team. Transform Claude into your AI research assistant capable of executing complex multi-step scientific workflows across biology, chemistry, medicine, and beyond.
A comprehensive collection of **125+ ready-to-use scientific skills** for Claude, created by the K-Dense team. Transform Claude into your AI research assistant capable of executing complex multi-step scientific workflows across biology, chemistry, medicine, and beyond.
These skills enable Claude to seamlessly work with specialized scientific libraries, databases, and tools across multiple scientific domains:
- 🧬 Bioinformatics & Genomics - Sequence analysis, single-cell RNA-seq, gene regulatory networks, variant annotation, phylogenetic analysis
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## 📦 What's Included
This repository provides **124+ scientific skills** organized into the following categories:
This repository provides **125+ scientific skills** organized into the following categories:
- **26+ Scientific Databases** - Direct API access to OpenAlex, PubMed, ChEMBL, UniProt, COSMIC, ClinicalTrials.gov, and more
- **52+ Python Packages** - RDKit, Scanpy, PyTorch Lightning, scikit-learn, BioPython, GeoPandas, and others
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- **Multi-Step Workflows** - Execute complex pipelines with a single prompt
### 🎯 **Comprehensive Coverage**
- **124+ Skills** - Extensive coverage across all major scientific domains
- **125+ Skills** - Extensive coverage across all major scientific domains
- **26+ Databases** - Direct access to OpenAlex, PubMed, ChEMBL, UniProt, COSMIC, and more
- **52+ Python Packages** - RDKit, Scanpy, PyTorch Lightning, scikit-learn, GeoPandas, and others
@@ -335,7 +335,7 @@ networks, and search GEO for similar patterns.
## 📚 Available Skills
This repository contains **121+ scientific skills** organized across multiple domains. Each skill provides comprehensive documentation, code examples, and best practices for working with scientific libraries, databases, and tools.
This repository contains **122+ scientific skills** organized across multiple domains. Each skill provides comprehensive documentation, code examples, and best practices for working with scientific libraries, databases, and tools.
### Skill Categories
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- Dimensionality reduction: UMAP-learn
- Statistical modeling: statsmodels
#### 🔮 **Materials Science & Chemistry** (3 skills)
#### 🔮 **Materials Science, Chemistry & Physics** (4 skills)
- Materials: Pymatgen
- Metabolic modeling: COBRApy
- Astronomy: Astropy
- Quantum computing: Cirq
#### ⚙️ **Engineering & Simulation** (3 skills)
- Computational fluid dynamics: FluidSim