skills/claude-scientific-skills
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Updated skill descrtipotions to resolve possible conflicts in their use

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Vinayak Agarwal
2025-10-26 18:52:50 -07:00
parent 1f03feda5c
commit 26d4fde324
8 changed files with 8 additions and 8 deletions
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scientific-databases/kegg-database/SKILL.md
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---
name: kegg-database
description: "Query KEGG REST API for pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion, compound structures, for systems biology and enrichment analysis."
description: "Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control."
---
# KEGG Database

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scientific-databases/pubmed-database/SKILL.md
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---
name: pubmed-database
description: "Search PubMed biomedical literature. Advanced queries with Boolean/MeSH/field tags, E-utilities API access, batch processing, citation management, for literature review and systematic analysis."
description: "Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations."
---
# PubMed Database

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scientific-databases/uniprot-database/SKILL.md
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---
name: uniprot-database
description: "Query UniProt protein database REST API. Search proteins by name/gene/accession, retrieve sequences (FASTA), annotations, ID mapping, Swiss-Prot/TrEMBL, GO terms, for protein analysis."
description: "Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, prefer bioservices (unified interface to 40+ services). Use this for direct HTTP/REST work or UniProt-specific control."
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# UniProt Database