Updated installation instructions for all skills to always use uv pip install

This commit is contained in:
Timothy Kassis
2025-11-16 15:34:52 -08:00
parent d94f21c51f
commit 2fc3e6a88e
82 changed files with 179 additions and 290 deletions

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@@ -139,7 +139,7 @@ results = advanced_geo_search(search_terms)
**Installation:**
```bash
pip install GEOparse
uv pip install GEOparse
```
**Basic Usage:**
@@ -642,19 +642,19 @@ print(meta_results)
```bash
# Primary GEO access library (recommended)
pip install GEOparse
uv pip install GEOparse
# For E-utilities and programmatic NCBI access
pip install biopython
uv pip install biopython
# For data analysis
pip install pandas numpy scipy
uv pip install pandas numpy scipy
# For visualization
pip install matplotlib seaborn
uv pip install matplotlib seaborn
# For statistical analysis
pip install statsmodels scikit-learn
uv pip install statsmodels scikit-learn
```
### Configuration