Add more scientific skills

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Timothy Kassis
2025-10-19 14:12:02 -07:00
parent 78d5ac2b56
commit 660c8574d0
210 changed files with 88957 additions and 1 deletions

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"""
Helper script to quickly set up a PyTorch Lightning Trainer with common configurations.
This script provides preset configurations for different training scenarios
and makes it easy to create a Trainer with best practices.
"""
import lightning as L
from lightning.pytorch.callbacks import (
ModelCheckpoint,
EarlyStopping,
LearningRateMonitor,
RichProgressBar,
ModelSummary,
)
from lightning.pytorch.loggers import TensorBoardLogger, CSVLogger
def create_trainer(
preset: str = "default",
max_epochs: int = 100,
accelerator: str = "auto",
devices: int = 1,
log_dir: str = "./logs",
experiment_name: str = "lightning_experiment",
enable_checkpointing: bool = True,
enable_early_stopping: bool = True,
**kwargs
):
"""
Create a Lightning Trainer with preset configurations.
Args:
preset: Configuration preset - "default", "fast_dev", "production", "distributed"
max_epochs: Maximum number of training epochs
accelerator: Device to use ("auto", "gpu", "cpu", "tpu")
devices: Number of devices to use
log_dir: Directory for logs and checkpoints
experiment_name: Name for the experiment
enable_checkpointing: Whether to enable model checkpointing
enable_early_stopping: Whether to enable early stopping
**kwargs: Additional arguments to pass to Trainer
Returns:
Configured Lightning Trainer instance
"""
callbacks = []
logger_list = []
# Configure based on preset
if preset == "fast_dev":
# Fast development run - minimal epochs, quick debugging
config = {
"fast_dev_run": False,
"max_epochs": 3,
"limit_train_batches": 100,
"limit_val_batches": 50,
"log_every_n_steps": 10,
"enable_progress_bar": True,
"enable_model_summary": True,
}
elif preset == "production":
# Production-ready configuration with all bells and whistles
config = {
"max_epochs": max_epochs,
"precision": "16-mixed",
"gradient_clip_val": 1.0,
"log_every_n_steps": 50,
"enable_progress_bar": True,
"enable_model_summary": True,
"deterministic": True,
"benchmark": True,
}
# Add model checkpointing
if enable_checkpointing:
callbacks.append(
ModelCheckpoint(
dirpath=f"{log_dir}/{experiment_name}/checkpoints",
filename="{epoch}-{val_loss:.2f}",
monitor="val_loss",
mode="min",
save_top_k=3,
save_last=True,
verbose=True,
)
)
# Add early stopping
if enable_early_stopping:
callbacks.append(
EarlyStopping(
monitor="val_loss",
patience=10,
mode="min",
verbose=True,
)
)
# Add learning rate monitor
callbacks.append(LearningRateMonitor(logging_interval="epoch"))
# Add TensorBoard logger
logger_list.append(
TensorBoardLogger(
save_dir=log_dir,
name=experiment_name,
version=None,
)
)
elif preset == "distributed":
# Distributed training configuration
config = {
"max_epochs": max_epochs,
"strategy": "ddp",
"precision": "16-mixed",
"sync_batchnorm": True,
"use_distributed_sampler": True,
"log_every_n_steps": 50,
"enable_progress_bar": True,
}
# Add model checkpointing
if enable_checkpointing:
callbacks.append(
ModelCheckpoint(
dirpath=f"{log_dir}/{experiment_name}/checkpoints",
filename="{epoch}-{val_loss:.2f}",
monitor="val_loss",
mode="min",
save_top_k=3,
save_last=True,
)
)
else: # default
# Default configuration - balanced for most use cases
config = {
"max_epochs": max_epochs,
"log_every_n_steps": 50,
"enable_progress_bar": True,
"enable_model_summary": True,
}
# Add basic checkpointing
if enable_checkpointing:
callbacks.append(
ModelCheckpoint(
dirpath=f"{log_dir}/{experiment_name}/checkpoints",
filename="{epoch}-{val_loss:.2f}",
monitor="val_loss",
save_last=True,
)
)
# Add CSV logger
logger_list.append(
CSVLogger(
save_dir=log_dir,
name=experiment_name,
)
)
# Add progress bar
if config.get("enable_progress_bar", True):
callbacks.append(RichProgressBar())
# Merge with provided kwargs
final_config = {
**config,
"accelerator": accelerator,
"devices": devices,
"callbacks": callbacks,
"logger": logger_list if logger_list else True,
**kwargs,
}
# Create and return trainer
return L.Trainer(**final_config)
def create_debugging_trainer():
"""Create a trainer optimized for debugging."""
return create_trainer(
preset="fast_dev",
max_epochs=1,
limit_train_batches=10,
limit_val_batches=5,
num_sanity_val_steps=2,
)
def create_gpu_trainer(num_gpus: int = 1, precision: str = "16-mixed"):
"""Create a trainer optimized for GPU training."""
return create_trainer(
preset="production",
accelerator="gpu",
devices=num_gpus,
precision=precision,
)
def create_distributed_trainer(num_gpus: int = 2, num_nodes: int = 1):
"""Create a trainer for distributed training across multiple GPUs."""
return create_trainer(
preset="distributed",
accelerator="gpu",
devices=num_gpus,
num_nodes=num_nodes,
strategy="ddp",
)
# Example usage
if __name__ == "__main__":
print("Creating different trainer configurations...\n")
# 1. Default trainer
print("1. Default trainer:")
trainer_default = create_trainer(preset="default", max_epochs=50)
print(f" Max epochs: {trainer_default.max_epochs}")
print(f" Accelerator: {trainer_default.accelerator}")
print(f" Callbacks: {len(trainer_default.callbacks)}")
print()
# 2. Fast development trainer
print("2. Fast development trainer:")
trainer_dev = create_trainer(preset="fast_dev")
print(f" Max epochs: {trainer_dev.max_epochs}")
print(f" Train batches limit: {trainer_dev.limit_train_batches}")
print()
# 3. Production trainer
print("3. Production trainer:")
trainer_prod = create_trainer(
preset="production",
max_epochs=100,
experiment_name="my_experiment"
)
print(f" Max epochs: {trainer_prod.max_epochs}")
print(f" Precision: {trainer_prod.precision}")
print(f" Callbacks: {len(trainer_prod.callbacks)}")
print()
# 4. Debugging trainer
print("4. Debugging trainer:")
trainer_debug = create_debugging_trainer()
print(f" Max epochs: {trainer_debug.max_epochs}")
print(f" Train batches: {trainer_debug.limit_train_batches}")
print()
# 5. GPU trainer
print("5. GPU trainer:")
trainer_gpu = create_gpu_trainer(num_gpus=1)
print(f" Accelerator: {trainer_gpu.accelerator}")
print(f" Precision: {trainer_gpu.precision}")
print()
print("All trainer configurations created successfully!")