skills/claude-scientific-skills
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Add support for Rowan computational platform that provides a suite of design and simulation tools for chemical R&D

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Timothy Kassis
2026-01-12 13:22:43 -08:00
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# Claude Scientific Skills
[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](LICENSE.md)
[![Skills](https://img.shields.io/badge/Skills-139-brightgreen.svg)](#whats-included)
[![Skills](https://img.shields.io/badge/Skills-140-brightgreen.svg)](#whats-included)
A comprehensive collection of **139 ready-to-use scientific skills** for Claude, created by [K-Dense](https://k-dense.ai). Transform Claude into your AI research assistant capable of executing complex multi-step scientific workflows across biology, chemistry, medicine, and beyond.
A comprehensive collection of **140 ready-to-use scientific skills** for Claude, created by [K-Dense](https://k-dense.ai). Transform Claude into your AI research assistant capable of executing complex multi-step scientific workflows across biology, chemistry, medicine, and beyond.
**Looking for the full AI co-scientist experience?** Try [K-Dense Web](https://app.k-dense.ai) for 200+ skills, cloud compute, and publication-ready outputs.
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| Feature | This Repo | K-Dense Web |
|---------|-----------|-------------|
| Scientific Skills | 139 skills | **200+ skills** (exclusive access) |
| Scientific Skills | 140 skills | **200+ skills** (exclusive access) |
| Setup Required | Manual installation | **Zero setup** — works instantly |
| Compute | Your machine | **Cloud GPUs & HPC** included |
| Workflows | Basic prompts | **End-to-end research pipelines** |
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## 📦 What's Included
This repository provides **139 scientific skills** organized into the following categories:
This repository provides **140 scientific skills** organized into the following categories:
- **28+ Scientific Databases** - Direct API access to OpenAlex, PubMed, bioRxiv, ChEMBL, UniProt, COSMIC, ClinicalTrials.gov, and more
- **55+ Python Packages** - RDKit, Scanpy, PyTorch Lightning, scikit-learn, BioPython, BioServices, PennyLane, Qiskit, and others
@@ -111,7 +111,7 @@ Each skill includes:
- **Multi-Step Workflows** - Execute complex pipelines with a single prompt
### 🎯 **Comprehensive Coverage**
- **139 Skills** - Extensive coverage across all major scientific domains
- **140 Skills** - Extensive coverage across all major scientific domains
- **28+ Databases** - Direct access to OpenAlex, PubMed, bioRxiv, ChEMBL, UniProt, COSMIC, and more
- **55+ Python Packages** - RDKit, Scanpy, PyTorch Lightning, scikit-learn, BioServices, PennyLane, Qiskit, and others
@@ -368,7 +368,7 @@ networks, and search GEO for similar patterns.
## 📚 Available Skills
This repository contains **139 scientific skills** organized across multiple domains. Each skill provides comprehensive documentation, code examples, and best practices for working with scientific libraries, databases, and tools.
This repository contains **140 scientific skills** organized across multiple domains. Each skill provides comprehensive documentation, code examples, and best practices for working with scientific libraries, databases, and tools.
### Skill Categories
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- Genomic tools: gget, geniml, gtars, deepTools, FlowIO, Zarr
- Phylogenetics: ETE Toolkit
#### 🧪 **Cheminformatics & Drug Discovery** (10+ skills)
#### 🧪 **Cheminformatics & Drug Discovery** (11+ skills)
- Molecular manipulation: RDKit, Datamol, Molfeat
- Deep learning: DeepChem, TorchDrug
- Docking & screening: DiffDock
- Cloud quantum chemistry: Rowan (pKa, docking, cofolding)
- Drug-likeness: MedChem
- Benchmarks: PyTDC