Commit Graph

4 Commits

Author SHA1 Message Date
Jeremy Leipzig
e3a7a85122 Remove multiple advanced export sections
- Remove VEP annotation preparation section
- Remove Cloud Export (S3) section
- Remove Export Validation section
- Remove Efficient Export Strategies section
- Simplify export guide to focus on core export functionality
- Maintain essential VCF/BCF and TSV export examples
2026-02-24 11:17:41 -07:00
Jeremy Leipzig
518261c4f2 Remove Streaming Export for Large Datasets section
- Remove chunked export functionality
- Remove parallel export functionality
- Simplify export guide to focus on basic export operations
2026-02-24 11:13:01 -07:00
Jeremy Leipzig
70a34bd652 Remove Custom Field Selection and Population-Specific Exports sections
- Remove detailed custom TSV field configuration section
- Remove population-based export workflow section
- Simplify export guide to focus on core functionality
2026-02-24 11:11:53 -07:00
Jeremy Leipzig
3c98f0cada Add TileDB-VCF skill for genomic variant analysis
- Add comprehensive TileDB-VCF skill by Jeremy Leipzig
- Covers open source TileDB-VCF for learning and moderate-scale work
- Emphasizes TileDB-Cloud for large-scale production genomics (1000+ samples)
- Includes detailed reference documentation:
  * ingestion.md - Dataset creation and VCF ingestion
  * querying.md - Efficient variant queries
  * export.md - Data export and format conversion
  * population_genomics.md - GWAS and population analysis workflows
- Features accurate TileDB-Cloud API patterns from official repository
- Highlights scale transition: open source → TileDB-Cloud for enterprise
2026-02-24 09:31:48 -07:00