Commit Graph

134 Commits

Author SHA1 Message Date
Timothy Kassis
92b4e024d1 Addition of ESM, SHAP, scvi-tools...and much more! v1.54.0 2025-10-23 09:12:41 -07:00
Timothy Kassis
3fbd9ba6a9 Add utility skill to get system resources 2025-10-23 09:12:01 -07:00
Timothy Kassis
62ddd1296c Add ESM3 and ESM C models protein models 2025-10-23 09:10:34 -07:00
Timothy Kassis
a11ca9c100 Add sciv-tools providing models for single cell sequencing 2025-10-23 09:09:18 -07:00
Timothy Kassis
db2cedb2fb Add SHAP for model explainability 2025-10-23 09:08:27 -07:00
Timothy Kassis
87a608730c Add support for bioRxiv database search and paper downloading 2025-10-23 08:51:45 -07:00
Timothy Kassis
0943c243bb Added full support for ToolUniverse. Claude Code can now use the tools it provide as it needs without the MCP being a gateway. v1.53.0 2025-10-22 14:59:27 -07:00
Timothy Kassis
0b5a648e98 Add Paper2Web v1.52.0 2025-10-22 08:50:06 -07:00
Timothy Kassis
77822efeed Improved Biomni support v1.51.0 2025-10-22 08:38:06 -07:00
Timothy Kassis
71a3c3750f Enhance README with detailed examples for complex scientific workflows across drug discovery, bioinformatics, and clinical genomics, showcasing multi-step processes and integration of various tools. 2025-10-22 08:24:40 -07:00
Timothy Kassis
9584469988 Refactor release notes generation in workflow to remove version header and streamline output 2025-10-22 08:21:43 -07:00
Timothy Kassis
685da0082c Add automatic releases v1.50.0 2025-10-22 08:17:56 -07:00
Timothy Kassis
08608e824a Use Agent.md 2025-10-21 17:35:37 -07:00
Vinayak Agarwal
c67e840088 Added new skills to create claude.md files for better skill use 2025-10-21 15:06:34 -07:00
Timothy Kassis
000a45c0e9 Apply best practices 2025-10-21 12:50:07 -07:00
Timothy Kassis
998a514f74 Update biopython skill 2025-10-21 10:47:34 -07:00
Timothy Kassis
11da596765 Update Huggingface Transformer 2025-10-21 10:30:38 -07:00
Timothy Kassis
1a9149b089 Improve Pytorch Lightning skill 2025-10-21 10:19:15 -07:00
Timothy Kassis
aacc29a778 Add TorchDrug 2025-10-21 10:03:00 -07:00
Timothy Kassis
71e1c91f12 Better adherence to recommendations 2025-10-21 09:43:34 -07:00
Timothy Kassis
32109101d0 Fix descriptions to adhere to character limits 2025-10-21 09:33:30 -07:00
Timothy Kassis
163d6b9d6b Improve docs 2025-10-21 09:13:59 -07:00
Timothy Kassis
dc22577e2f Update README to include information about the newly released MPC server, enabling the use of Claude Skills across various clients such as ChatGPT and Google ADK. 2025-10-21 09:00:02 -07:00
Vinayak Agarwal
9641b17067 Enhance README with detailed descriptions for Seaborn, Scientific Visualization, and Scientific Writing sections, emphasizing features like dataset-oriented interfaces, automatic confidence intervals, and field-specific terminology for improved clarity and usability. 2025-10-21 00:22:48 -07:00
Vinayak Agarwal
6e8d1c29b9 Add Seaborn integration for enhanced statistical visualization techniques in scientific plots. Include quick start guides, common plot types, and best practices for publication-ready figures, emphasizing colorblind-safe palettes and automatic confidence intervals. 2025-10-21 00:16:38 -07:00
Vinayak Agarwal
02dae0f30c Enhance scientific writing resources with detailed guidelines on field-specific terminology, citation styles, figure and table requirements, and reporting standards. Include venue-specific structure expectations and writing style comparisons to aid authors in adapting their manuscripts for various journals and conferences. 2025-10-21 00:04:29 -07:00
Timothy Kassis
41f15bd29c Add scientific writing skill 2025-10-20 22:56:17 -07:00
Timothy Kassis
99f3b961e0 Add LatchBio integration 2025-10-20 22:42:09 -07:00
Timothy Kassis
16143f1167 Add USPTO and OpenTargets databases 2025-10-20 22:34:37 -07:00
Timothy Kassis
6e10c5e8da Update README to reflect changes in scientific packages, integrations, and workflows, including the addition of new entries and updated counts. 2025-10-20 22:19:18 -07:00
Timothy Kassis
fd9f5abbbe Add FDA database 2025-10-20 22:14:49 -07:00
Timothy Kassis
a317857db5 Add ClincialTrials database 2025-10-20 22:04:13 -07:00
Timothy Kassis
07f81f2ff3 Add integrations 2025-10-20 21:56:27 -07:00
Timothy Kassis
ac70437180 Enhance README with new scientific integrations, updated database entries, and improved descriptions across various sections, including bioinformatics, cheminformatics, and machine learning. 2025-10-20 21:31:48 -07:00
Timothy Kassis
2273130f5f Add benchling 2025-10-20 21:28:25 -07:00
Timothy Kassis
c73c256f89 Merge branch 'main' of https://github.com/K-Dense-AI/claude-scientific-skills 2025-10-20 21:05:28 -07:00
Timothy Kassis
4bbf646bc6 Update README to reflect an increase in unique workflows from 59 to 94 2025-10-20 21:04:26 -07:00
Timothy Kassis
e1506111c0 Merge pull request #1 from K-Dense-AI/orion/fix-yaml-description-colon
Update SKILL.md files to add double quotation marks for all skills
2025-10-20 21:02:43 -07:00
Haoxuan "Orion" Li
c2b16829f6 Update SKILL.md files to add double quotation marks for all skills, ensuring clarity and consistency across all entries. 2025-10-20 20:51:50 -07:00
Timothy Kassis
c0fa308af8 Enhance README with detailed contribution guidelines and expanded repository capabilities 2025-10-20 20:26:56 -07:00
Timothy Kassis
9ce9745de6 Add statmodels 2025-10-20 20:17:16 -07:00
Timothy Kassis
50b1b5e607 Add pysam 2025-10-20 19:02:16 -07:00
Timothy Kassis
86243b1c45 Add matchms 2025-10-20 18:10:20 -07:00
Timothy Kassis
ee66557f21 Add Dask to Data Analysis & Visualization section in README 2025-10-20 17:50:30 -07:00
Timothy Kassis
fac5860912 Add Dask 2025-10-20 17:47:37 -07:00
Timothy Kassis
c7296b2661 Add PyOpenms 2025-10-20 17:26:45 -07:00
Timothy Kassis
df81c94a7a Improve package descriptions 2025-10-20 16:19:48 -07:00
Timothy Kassis
04087666b7 Improve thinking skills descriptions 2025-10-20 16:05:31 -07:00
Timothy Kassis
00c69058c3 Improve database description for more reliable skill calling 2025-10-20 16:02:48 -07:00
Timothy Kassis
50507d26bb Update PubMed database description for clarity and specificity in research applications 2025-10-20 15:39:07 -07:00