skills/claude-scientific-skills
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Disambiguate descriptions

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Timothy Kassis
2026-01-05 14:25:22 -08:00
parent 15d9e4699a
commit 9cb0c2f934
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scientific-skills/scanpy/SKILL.md
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---
name: scanpy
description: "Single-cell RNA-seq analysis. Load .h5ad/10X data, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker genes, cell type annotation, trajectory, for scRNA-seq analysis."
description: Standard single-cell RNA-seq analysis pipeline. Use for QC, normalization, dimensionality reduction (PCA/UMAP/t-SNE), clustering, differential expression, and visualization. Best for exploratory scRNA-seq analysis with established workflows. For deep learning models use scvi-tools; for data format questions use anndata.
license: SD-3-Clause license
metadata:
skill-author: K-Dense Inc.