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All 40 references to borealBytes/opencode updated to the correct source: https://github.com/SuperiorByteWorks-LLC/agent-project Affected files: SKILL.md, all 24 diagram guides, 9 templates, issue and PR docs, plus assets/examples/example-research-report.md (new file). The example report demonstrates full skill usage: flowchart, sequence, timeline, xychart, radar diagrams — all with accTitle/accDescr and classDef colors, no %%{init}. Covers HEK293T CRISPR editing efficiency as a realistic scientific context.
178 lines
6.8 KiB
Markdown
178 lines
6.8 KiB
Markdown
<!-- Source: https://github.com/SuperiorByteWorks-LLC/agent-project | License: Apache-2.0 | Author: Clayton Young / Superior Byte Works, LLC (Boreal Bytes) -->
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# Flowchart
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> **Back to [Style Guide](../mermaid_style_guide.md)** — Read the style guide first for emoji, color, and accessibility rules.
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**Syntax keyword:** `flowchart`
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**Best for:** Sequential processes, workflows, decision logic, troubleshooting trees
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**When NOT to use:** Complex timing between actors (use [Sequence](sequence.md)), state machines (use [State](state.md))
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---
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## Exemplar Diagram
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```mermaid
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flowchart TB
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accTitle: Feature Development Lifecycle
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accDescr: End-to-end feature flow from idea through design, build, test, review, and release with a revision loop on failed reviews
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idea([💡 Feature idea]) --> spec[📋 Write spec]
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spec --> design[🎨 Design solution]
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design --> build[🔧 Implement]
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build --> test[🧪 Run tests]
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test --> review{🔍 Review passed?}
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review -->|Yes| release[🚀 Release to prod]
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review -->|No| revise[✏️ Revise code]
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revise --> test
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release --> monitor([📊 Monitor metrics])
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classDef start fill:#ede9fe,stroke:#7c3aed,stroke-width:2px,color:#3b0764
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classDef process fill:#dbeafe,stroke:#2563eb,stroke-width:2px,color:#1e3a5f
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classDef decision fill:#fef9c3,stroke:#ca8a04,stroke-width:2px,color:#713f12
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classDef success fill:#dcfce7,stroke:#16a34a,stroke-width:2px,color:#14532d
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class idea,monitor start
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class spec,design,build,test,revise process
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class review decision
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class release success
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```
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---
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## Tips
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- Use `TB` (top-to-bottom) for processes, `LR` (left-to-right) for pipelines
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- Rounded rectangles `([text])` for start/end, diamonds `{text}` for decisions
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- Max 10 nodes — split larger flows into "Phase 1" / "Phase 2" diagrams
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- Max 3 decision points per diagram
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- Edge labels should be 1–4 words: `-->|Yes|`, `-->|All green|`
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- Use `classDef` for **semantic** coloring — decisions in amber, success in green, actions in blue
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## Subgraph Pattern
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When you need grouped stages:
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```mermaid
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flowchart TB
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accTitle: CI/CD Pipeline Stages
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accDescr: Three-stage pipeline grouping code quality checks, testing, and deployment into distinct phases
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trigger([⚡ Push to main])
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subgraph quality ["🔍 Code Quality"]
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lint[📝 Lint code] --> format[⚙️ Check formatting]
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end
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subgraph testing ["🧪 Testing"]
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unit[🧪 Unit tests] --> integration[🔗 Integration tests]
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end
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subgraph deploy ["🚀 Deployment"]
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build[📦 Build artifacts] --> ship[☁️ Deploy to staging]
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end
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trigger --> quality
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quality --> testing
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testing --> deploy
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deploy --> done([✅ Pipeline complete])
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classDef trigger_style fill:#ede9fe,stroke:#7c3aed,stroke-width:2px,color:#3b0764
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classDef success fill:#dcfce7,stroke:#16a34a,stroke-width:2px,color:#14532d
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class trigger trigger_style
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class done success
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```
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---
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## Template
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```mermaid
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flowchart TB
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accTitle: Your Title Here (3-8 words)
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accDescr: One or two sentences explaining what this diagram shows and what insight the reader gains
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start([🏁 Starting point]) --> step1[⚙️ First action]
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step1 --> decision{🔍 Check condition?}
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decision -->|Yes| step2[✅ Positive path]
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decision -->|No| step3[🔧 Alternative path]
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step2 --> done([🏁 Complete])
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step3 --> done
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```
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---
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## Complex Example
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A 20+ node e-commerce order pipeline organized into 5 subgraphs, each representing a processing phase. Subgraphs connect through internal nodes, decision points route orders to exception handling, and color classes distinguish phases at a glance.
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```mermaid
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flowchart TB
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accTitle: E-Commerce Order Processing Pipeline
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accDescr: Full order lifecycle from intake through fulfillment, shipping, and notification with exception handling paths for payment failures, stockouts, and delivery issues
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order_in([📥 New order]) --> validate_pay{💰 Payment valid?}
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subgraph intake ["📥 Order Intake"]
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validate_pay -->|Yes| check_fraud{🔐 Fraud check}
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validate_pay -->|No| pay_fail[❌ Payment **declined**]
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check_fraud -->|Clear| check_stock{📦 In stock?}
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check_fraud -->|Flagged| manual_review[🔍 Manual **review**]
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manual_review --> check_stock
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end
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subgraph fulfill ["📦 Fulfillment"]
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pick[📋 **Pick** items] --> pack[📦 Pack order]
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pack --> label[🏷️ Generate **shipping** label]
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end
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subgraph ship ["🚚 Shipping"]
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handoff[🚚 Carrier **handoff**] --> transit[📍 In transit]
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transit --> deliver{✅ Delivered?}
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end
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subgraph notify ["📤 Notifications"]
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confirm_email[📧 Order **confirmed**]
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ship_update[📧 Shipping **update**]
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deliver_email[📧 Delivery **confirmed**]
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end
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subgraph exception ["⚠️ Exception Handling"]
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pay_fail --> retry_pay[🔄 Retry payment]
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retry_pay --> validate_pay
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out_of_stock[📦 **Backorder** created]
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deliver_fail[🔄 **Reattempt** delivery]
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end
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check_stock -->|Yes| pick
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check_stock -->|No| out_of_stock
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label --> handoff
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deliver -->|Yes| deliver_email
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deliver -->|No| deliver_fail
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deliver_fail --> transit
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check_stock -->|Yes| confirm_email
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handoff --> ship_update
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deliver_email --> complete([✅ Order **complete**])
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classDef intake_style fill:#dbeafe,stroke:#2563eb,stroke-width:2px,color:#1e3a5f
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classDef fulfill_style fill:#ede9fe,stroke:#7c3aed,stroke-width:2px,color:#3b0764
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classDef ship_style fill:#dcfce7,stroke:#16a34a,stroke-width:2px,color:#14532d
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classDef warn_style fill:#fef9c3,stroke:#ca8a04,stroke-width:2px,color:#713f12
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classDef danger_style fill:#fee2e2,stroke:#dc2626,stroke-width:2px,color:#7f1d1d
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class validate_pay,check_fraud,check_stock,manual_review intake_style
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class pick,pack,label fulfill_style
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class handoff,transit,deliver ship_style
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class confirm_email,ship_update,deliver_email warn_style
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class pay_fail,retry_pay,out_of_stock,deliver_fail danger_style
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```
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### Why this works
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- **5 subgraphs map to real business phases** — intake, fulfillment, shipping, notification, and exceptions are how operations teams actually think about orders
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- **Exception handling is its own subgraph** — not scattered across phases. Agents and readers can see all failure paths in one place
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- **Color classes reinforce structure** — blue for intake, purple for fulfillment, green for shipping, amber for notifications, red for exceptions. Even without reading labels, the color pattern tells you which phase you're looking at
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- **Decisions route between subgraphs** — the diamonds (`{Payment valid?}`, `{In stock?}`, `{Delivered?}`) are the points where flow branches, and each branch leads to a clearly-labeled destination
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