Commit Graph

82 Commits

Author SHA1 Message Date
Timothy Kassis
f32b3f8b42 Add support for SymPY for symbolic mathematics that enables algebraic manipulation, equation solving, calculus, and symbolic computation directly in Python. 2025-11-02 14:30:20 -08:00
Timothy Kassis
ed2d1c4aeb Add support for NetworkX for creating, analyzing, and visualizing complex networks and graphs. 2025-11-02 14:19:20 -08:00
Timothy Kassis
7e3fae3ad1 Add support to LaminDB 2025-10-31 11:39:54 -07:00
Timothy Kassis
97c03a11e5 Add Claude Code installation instructions 2025-10-31 11:21:01 -07:00
Timothy Kassis
b6bb261a71 Consolidate getting started 2025-10-31 09:49:48 -07:00
Haoxuan "Orion" Li
aa5018612f Update README to include quick installation instructions for Cursor users and clarify MCP server usage across various clients. 2025-10-30 15:01:20 -07:00
Timothy Kassis
f12f9c2904 Enhance README by adding a call to action for users to star the repository, promoting visibility and ongoing maintenance. 2025-10-28 17:57:09 -07:00
Timothy Kassis
55af02f2d4 Add star history 2025-10-28 17:52:44 -07:00
Timothy Kassis
346010a1bf Add Markitdown skill to read all sorts of documents 2025-10-28 16:31:01 -07:00
Timothy Kassis
5b37b62147 Update README to reflect the increase in equivalent tools from 500 to 1002 2025-10-28 15:54:00 -07:00
Timothy Kassis
82901e9fbe Add hypothesis generation using HypoGeniC and HypoRefine 2025-10-28 12:53:43 -07:00
Timothy Kassis
981823a71a Add ScholarEval as a thinking framework 2025-10-28 10:45:34 -07:00
Timothy Kassis
1f03feda5c Add protocols.io integration 2025-10-26 11:09:03 -07:00
Timothy Kassis
44285238c4 Fix context initialization by using AGENTS.md instead of AGENT.md 2025-10-26 10:18:45 -07:00
Timothy Kassis
04d528c4bc Added support for NeuroKit2 2025-10-25 21:38:31 -07:00
Timothy Kassis
a5c2ed9bb6 Add literature review skill 2025-10-25 10:55:36 -07:00
Timothy Kassis
295370a730 Update README.md to replace downloads and workflows badges with an equivalent tools badge for improved clarity. 2025-10-25 10:38:43 -07:00
Timothy Kassis
4fde8cb6de Enhance README.md by adding a downloads badge to track total downloads of the project. 2025-10-24 19:41:22 -07:00
Timothy Kassis
564bd39835 Add support for HistoLab 2025-10-24 13:41:06 -07:00
Timothy Kassis
1871693348 Enhance README.md with detailed instructions for various workflows, emphasizing the importance of organized output and the creation of comprehensive documentation and visualizations. 2025-10-24 09:30:56 -07:00
Timothy Kassis
0e03bbcf38 Update readme 2025-10-24 09:23:19 -07:00
Timothy Kassis
ca6fd369d7 Add DrugBank access 2025-10-24 09:04:43 -07:00
Timothy Kassis
d923063309 Change license to MIT allowing commercial use! 2025-10-23 20:48:01 -07:00
Timothy Kassis
ee73143b53 Add scikit-survival for survival analysis allowing users to establish connections between covariates and time of an event 2025-10-23 10:02:16 -07:00
Timothy Kassis
b1df506eba Add support for PyHealth making healthcare AI simpler and more powerful 2025-10-23 09:50:07 -07:00
Timothy Kassis
bb1c9f4573 Add support for PyDicom 2025-10-23 09:35:46 -07:00
Timothy Kassis
6cb25aea28 Add SimPy a process-based discrete-event simulation framework 2025-10-23 09:26:44 -07:00
Timothy Kassis
3fbd9ba6a9 Add utility skill to get system resources 2025-10-23 09:12:01 -07:00
Timothy Kassis
87a608730c Add support for bioRxiv database search and paper downloading 2025-10-23 08:51:45 -07:00
Timothy Kassis
0943c243bb Added full support for ToolUniverse. Claude Code can now use the tools it provide as it needs without the MCP being a gateway. 2025-10-22 14:59:27 -07:00
Timothy Kassis
0b5a648e98 Add Paper2Web 2025-10-22 08:50:06 -07:00
Timothy Kassis
71a3c3750f Enhance README with detailed examples for complex scientific workflows across drug discovery, bioinformatics, and clinical genomics, showcasing multi-step processes and integration of various tools. 2025-10-22 08:24:40 -07:00
Timothy Kassis
08608e824a Use Agent.md 2025-10-21 17:35:37 -07:00
Timothy Kassis
1a9149b089 Improve Pytorch Lightning skill 2025-10-21 10:19:15 -07:00
Timothy Kassis
aacc29a778 Add TorchDrug 2025-10-21 10:03:00 -07:00
Timothy Kassis
163d6b9d6b Improve docs 2025-10-21 09:13:59 -07:00
Timothy Kassis
dc22577e2f Update README to include information about the newly released MPC server, enabling the use of Claude Skills across various clients such as ChatGPT and Google ADK. 2025-10-21 09:00:02 -07:00
Vinayak Agarwal
9641b17067 Enhance README with detailed descriptions for Seaborn, Scientific Visualization, and Scientific Writing sections, emphasizing features like dataset-oriented interfaces, automatic confidence intervals, and field-specific terminology for improved clarity and usability. 2025-10-21 00:22:48 -07:00
Timothy Kassis
41f15bd29c Add scientific writing skill 2025-10-20 22:56:17 -07:00
Timothy Kassis
99f3b961e0 Add LatchBio integration 2025-10-20 22:42:09 -07:00
Timothy Kassis
16143f1167 Add USPTO and OpenTargets databases 2025-10-20 22:34:37 -07:00
Timothy Kassis
6e10c5e8da Update README to reflect changes in scientific packages, integrations, and workflows, including the addition of new entries and updated counts. 2025-10-20 22:19:18 -07:00
Timothy Kassis
fd9f5abbbe Add FDA database 2025-10-20 22:14:49 -07:00
Timothy Kassis
a317857db5 Add ClincialTrials database 2025-10-20 22:04:13 -07:00
Timothy Kassis
07f81f2ff3 Add integrations 2025-10-20 21:56:27 -07:00
Timothy Kassis
ac70437180 Enhance README with new scientific integrations, updated database entries, and improved descriptions across various sections, including bioinformatics, cheminformatics, and machine learning. 2025-10-20 21:31:48 -07:00
Timothy Kassis
2273130f5f Add benchling 2025-10-20 21:28:25 -07:00
Timothy Kassis
4bbf646bc6 Update README to reflect an increase in unique workflows from 59 to 94 2025-10-20 21:04:26 -07:00
Timothy Kassis
c0fa308af8 Enhance README with detailed contribution guidelines and expanded repository capabilities 2025-10-20 20:26:56 -07:00
Timothy Kassis
9ce9745de6 Add statmodels 2025-10-20 20:17:16 -07:00