Timothy Kassis
04a7be2319
Add Security Disclaimer section to README
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Introduced a new section outlining the security implications of using agent skills, emphasizing the importance of reviewing skills before installation. Included recommendations for safe usage and a reminder of the review process for contributions.
2026-03-25 09:31:25 -07:00
Timothy Kassis
1531326a59
Add K-Dense BYOK AI co-scientist to README with features and links
2026-03-22 17:50:53 -07:00
Timothy Kassis
3ff22d0c3a
Merge branch 'main' into feature/geomaster-skill
2026-03-06 14:39:04 -08:00
urabbani
85591617fc
Improve GeoMaster skill with Rust support, troubleshooting, and modern workflows
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Major improvements to the GeoMaster geospatial science skill:
### New Features
- Added Rust geospatial support (GeoRust crates: geo, proj, shapefile, rstar)
- Added comprehensive coordinate systems reference documentation
- Added troubleshooting guide with common error fixes
- Added cloud-native workflows (STAC, Planetary Computer, COG)
- Added automatic skill activation configuration
### Reference Documentation
- NEW: references/coordinate-systems.md - CRS fundamentals, UTM zones, EPSG codes
- NEW: references/troubleshooting.md - Installation fixes, runtime errors, performance tips
- UPDATED: references/programming-languages.md - Now covers 8 languages (added Rust)
### Main Skill File
- Streamlined SKILL.md from 690 to 362 lines (500-line rule compliance)
- Enhanced installation instructions with uv and conda
- Added modern cloud-native workflow examples
- Added performance optimization tips
### Documentation
- NEW: GEOMASTER_IMPROVEMENTS.md - Complete changelog and testing guide
- UPDATED: README.md - Highlight new capabilities
### Skill Activation
- Created skill-rules.json with 150+ keywords and 50+ intent patterns
- Supports file-based and content-based automatic activation
The skill now covers 8 programming languages (Python, R, Julia, JavaScript,
C++, Java, Go, Rust) with 500+ code examples across 70+ geospatial topics.
2026-03-05 14:26:09 +05:00
Yxjiang
3454f76e88
docs: add support and installation guide for Gemini CLI
2026-03-04 07:21:30 -08:00
Timothy Kassis
f198f38b22
Add social media links to README for enhanced visibility
2026-03-03 14:35:19 -08:00
Timothy Kassis
69fbf862bd
Add skills scanning
2026-03-03 08:26:21 -08:00
Timothy Kassis
3ed035e64c
Added around 23 new skills contributed by the community!
2026-03-03 08:17:25 -08:00
Timothy Kassis
b271271df4
Support for Ginkgo Cloud Lab
2026-03-02 09:53:41 -08:00
urabbani
e67029685b
Update README to include GeoMaster skill
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- Update skill count from 148 to 149
- Add GeoMaster to Data Analysis & Visualization section
- Add geospatial science domain to the main domains list
- Update skill count across all relevant sections
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com >
2026-03-02 14:32:35 +05:00
Timothy Kassis
29c869326e
Enhance README by adding a description of K-Dense Web, clarifying its role as a hosted platform built on the scientific skills collection. This addition aims to promote the platform's features and benefits.
2026-02-28 07:23:48 -08:00
Timothy Kassis
a472690126
Revise README to streamline content and promote K-Dense Web, highlighting its features and benefits. Remove outdated sections and enhance calls to action for cloud-based execution and publication-ready outputs.
2026-02-27 13:42:12 -08:00
Timothy Kassis
c58a309012
Update README to reflect the increase in scientific skills from 148 to 250+ databases, and enhance descriptions for Python package and integration skills. Adjust badge and feature tables accordingly.
2026-02-27 13:36:31 -08:00
Timothy Kassis
6040d02c8c
Update README and documentation to reflect the addition of the pyzotero skill and increment skill count from 147 to 148. Bump version to 2.24.0 in marketplace.json.
2026-02-27 09:38:51 -08:00
Jeremy Leipzig
791fd2361c
Update skill counts and add TileDB-VCF to repository documentation
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- Update skill count badges and descriptions from 146 to 147 skills
- Add TileDB-VCF to genomic tools list in bioinformatics section
- Add variant database management use case for TileDB-VCF
- Add comprehensive TileDB-VCF entry to docs/scientific-skills.md
2026-02-24 12:07:21 -07:00
Timothy Kassis
a33b572e44
Support Alpha Advantage for more financial data
2026-02-23 13:43:11 -08:00
Timothy Kassis
5490490294
Support for Hedge Fund Monitor from the Office of Financial Research
2026-02-23 13:32:09 -08:00
Timothy Kassis
86b5d1d30b
Add support for FiscalData.treasury.gov
2026-02-23 13:20:34 -08:00
Timothy Kassis
0ffa12a0e2
Support EdgarTools to access and analyze SEC Edgar filings, XBRL financial statements, 10-K, 10-Q, and 8-K reports
2026-02-23 13:02:15 -08:00
Timothy Kassis
9d0125f93b
Update readme
2026-02-17 16:34:41 -08:00
Timothy Kassis
c5413a6b5c
Remove Biomni due to incompatibilities
2026-01-21 09:11:38 -05:00
Haoxuan "Orion" Li
2a42585d11
docs: fix README text symbols
2026-01-15 16:05:02 -08:00
Haoxuan "Orion" Li
8578c44724
Merge branch 'main' into add-open-source-acknowledgements
2026-01-15 16:01:38 -08:00
Haoxuan "Orion" Li
b4e35897ae
docs: add acknowledgements and sponsor information on open source projects referenced
2026-01-15 16:00:45 -08:00
Timothy Kassis
25f29ac3db
Update readme
2026-01-15 12:49:04 -08:00
Timothy Kassis
bbe8a15cf7
Update README.md to include a link to a detailed comparison of K-Dense Web and Claude, and enhance contribution guidelines for adherence to the Agent Skills Specification.
2026-01-14 09:53:20 -08:00
Timothy Kassis
955a36ac82
Update README.md to enhance plugin installation instructions and add management commands
2026-01-12 17:17:47 -08:00
Timothy Kassis
e2e00231da
Add support for Rowan computational platform that provides a suite of design and simulation tools for chemical R&D
2026-01-12 13:22:43 -08:00
Haoxuan "Orion" Li
7232cf73a9
docs: add K-Dense Web GIF
2026-01-07 17:13:23 -08:00
Timothy Kassis
808578ba03
Enhance README.md with detailed comparison of features between the local repo and K-Dense Web, highlighting benefits such as zero setup, cloud compute, and advanced workflows.
2026-01-06 21:01:58 -08:00
Timothy Kassis
ca49c8c105
Update README.md to clarify capabilities and usage instructions for Claude Code and MCP clients
2026-01-05 17:23:58 -08:00
Timothy Kassis
70375367d6
Support for writing and executing MATLAB/Octave scripts
2026-01-05 10:15:22 -08:00
Timothy Kassis
9827af22ad
Update readme
2026-01-02 19:09:54 -08:00
Timothy Kassis
58a32ff246
Update readme
2026-01-02 19:09:01 -08:00
Timothy Kassis
8f337f1574
Clarify licensing terms in README.md to specify that while the repository is MIT licensed, individual skills may have different licenses. Added a section on individual skill licenses to ensure users understand their compliance responsibilities.
2026-01-02 13:50:33 -08:00
Timothy Kassis
57bde764fe
Added ISO 13485 certification prep skill
2025-12-29 11:12:50 -08:00
Robert
95a3b74b3b
Move Neuropixels-Analysis to new Neuroscience category
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Create new "🧠 Neuroscience & Electrophysiology" category for better
classification. Neuropixels is research neuroscience (animal models,
invasive recordings) rather than clinical healthcare AI.
- Remove from Healthcare AI section
- Add new Neuroscience & Electrophysiology section
- Keep NeuroKit2 in Healthcare AI (surface biosignals, clinical focus)
🤖 Generated with [Claude Code](https://claude.com/claude-code )
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com >
2025-12-17 11:20:00 -05:00
Robert
312f18ae60
Add neuropixels-analysis skill for extracellular electrophysiology
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Adds comprehensive toolkit for analyzing Neuropixels high-density neural
recordings using SpikeInterface, Allen Institute, and IBL best practices.
Features:
- Data loading from SpikeGLX, Open Ephys, and NWB formats
- Preprocessing pipelines (filtering, phase shift, CAR, bad channel detection)
- Motion/drift estimation and correction
- Spike sorting integration (Kilosort4, SpykingCircus2, Mountainsort5)
- Quality metrics computation (SNR, ISI violations, presence ratio)
- Automated curation using Allen/IBL criteria
- AI-assisted visual curation for uncertain units
- Export to Phy and NWB formats
Supports Neuropixels 1.0 and 2.0 probes.
🤖 Generated with [Claude Code](https://claude.com/claude-code )
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com >
2025-12-17 11:06:28 -05:00
Timothy Kassis
78331e1b37
Remove all writing skills for upcoming upgrade
2025-12-07 13:54:58 -08:00
Timothy Kassis
ab4aff4670
Update README.md to include a promotional note for k-dense.ai, enhancing visibility of advanced capabilities.
2025-12-07 13:41:35 -08:00
Timothy Kassis
6560f1d779
Change Flux.2-dev to flex since dev does not exist
2025-12-04 14:50:30 -08:00
Timothy Kassis
49567890a6
Add BRENDA enzyme database
2025-12-03 17:29:05 -08:00
Timothy Kassis
90de96a99b
Add support for generating scientific illustrations using Nano Banan Pro and Flux.2 Pro
2025-11-30 09:30:58 -05:00
Timothy Kassis
7e8deebf96
Add support for Qiskit from IBM: software stack for quantum computing and algorithms research. Build, optimize, and execute quantum workloads at scale.
2025-11-30 08:46:41 -05:00
Timothy Kassis
7763491813
Add support for PennyLane: a cross-platform library for quantum computing, quantum machine learning, and quantum chemistry.
2025-11-30 08:27:24 -05:00
Timothy Kassis
16e47a1755
Add support for Cirq: library for writing, manipulating, and optimizing quantum circuits, and then running them on quantum computers and quantum simulators.
2025-11-30 08:02:58 -05:00
Timothy Kassis
a077cee836
Add support for QuTiP: an open-source software for simulating the dynamics of open quantum systems.
2025-11-30 07:46:17 -05:00
Timothy Kassis
6ac2a15e39
Add support for GeoPandas
2025-11-27 18:57:26 -05:00
Timothy Kassis
41f272c2bd
Add Plotly support
2025-11-27 18:47:08 -05:00
Timothy Kassis
ea638c5618
Add support for Adaptyv for protein design
2025-11-24 19:52:45 -05:00
