53 Commits

Author	SHA1	Message	Date
Timothy Kassis	0943c243bb	Added full support for ToolUniverse. Claude Code can now use the tools it provide as it needs without the MCP being a gateway.	2025-10-22 14:59:27 -07:00
Timothy Kassis	0b5a648e98	Add Paper2Web	2025-10-22 08:50:06 -07:00
Timothy Kassis	71a3c3750f	Enhance README with detailed examples for complex scientific workflows across drug discovery, bioinformatics, and clinical genomics, showcasing multi-step processes and integration of various tools.	2025-10-22 08:24:40 -07:00
Timothy Kassis	08608e824a	Use Agent.md	2025-10-21 17:35:37 -07:00
Timothy Kassis	1a9149b089	Improve Pytorch Lightning skill	2025-10-21 10:19:15 -07:00
Timothy Kassis	aacc29a778	Add TorchDrug	2025-10-21 10:03:00 -07:00
Timothy Kassis	163d6b9d6b	Improve docs	2025-10-21 09:13:59 -07:00
Timothy Kassis	dc22577e2f	Update README to include information about the newly released MPC server, enabling the use of Claude Skills across various clients such as ChatGPT and Google ADK.	2025-10-21 09:00:02 -07:00
Vinayak Agarwal	9641b17067	Enhance README with detailed descriptions for Seaborn, Scientific Visualization, and Scientific Writing sections, emphasizing features like dataset-oriented interfaces, automatic confidence intervals, and field-specific terminology for improved clarity and usability.	2025-10-21 00:22:48 -07:00
Timothy Kassis	41f15bd29c	Add scientific writing skill	2025-10-20 22:56:17 -07:00
Timothy Kassis	99f3b961e0	Add LatchBio integration	2025-10-20 22:42:09 -07:00
Timothy Kassis	16143f1167	Add USPTO and OpenTargets databases	2025-10-20 22:34:37 -07:00
Timothy Kassis	6e10c5e8da	Update README to reflect changes in scientific packages, integrations, and workflows, including the addition of new entries and updated counts.	2025-10-20 22:19:18 -07:00
Timothy Kassis	fd9f5abbbe	Add FDA database	2025-10-20 22:14:49 -07:00
Timothy Kassis	a317857db5	Add ClincialTrials database	2025-10-20 22:04:13 -07:00
Timothy Kassis	07f81f2ff3	Add integrations	2025-10-20 21:56:27 -07:00
Timothy Kassis	ac70437180	Enhance README with new scientific integrations, updated database entries, and improved descriptions across various sections, including bioinformatics, cheminformatics, and machine learning.	2025-10-20 21:31:48 -07:00
Timothy Kassis	2273130f5f	Add benchling	2025-10-20 21:28:25 -07:00
Timothy Kassis	4bbf646bc6	Update README to reflect an increase in unique workflows from 59 to 94	2025-10-20 21:04:26 -07:00
Timothy Kassis	c0fa308af8	Enhance README with detailed contribution guidelines and expanded repository capabilities	2025-10-20 20:26:56 -07:00
Timothy Kassis	9ce9745de6	Add statmodels	2025-10-20 20:17:16 -07:00
Timothy Kassis	50b1b5e607	Add pysam	2025-10-20 19:02:16 -07:00
Timothy Kassis	86243b1c45	Add matchms	2025-10-20 18:10:20 -07:00
Timothy Kassis	ee66557f21	Add Dask to Data Analysis & Visualization section in README	2025-10-20 17:50:30 -07:00
Timothy Kassis	c7296b2661	Add PyOpenms	2025-10-20 17:26:45 -07:00
Timothy Kassis	56de6f97ce	Update README to streamline installation instructions for Claude Code and remove redundant sections	2025-10-20 13:25:39 -07:00
Timothy Kassis	bfaab6a785	Add GWAS	2025-10-20 08:56:49 -07:00
Timothy Kassis	19cbc58266	Fixe readme	2025-10-19 20:34:20 -07:00
Timothy Kassis	2141e5ab40	Remove DrugBank and TCGA entries from README database list	2025-10-19 19:33:29 -07:00
Timothy Kassis	4f46d37342	Add brainstorming skill	2025-10-19 19:29:33 -07:00
Timothy Kassis	3c71cfa82d	Add peer review	2025-10-19 19:25:08 -07:00
Timothy Kassis	9f4154a9ed	Add more databases	2025-10-19 19:16:45 -07:00
Timothy Kassis	56a8312fc9	Add HMDB	2025-10-19 19:01:24 -07:00
Timothy Kassis	1813407e4e	Add multiple scientific databases to README	2025-10-19 18:55:17 -07:00
Timothy Kassis	242f22a489	Add UniPort	2025-10-19 18:54:03 -07:00
Timothy Kassis	dd4e49670a	Add ENA	2025-10-19 18:45:58 -07:00
Timothy Kassis	4dae8c8a72	Add STRING	2025-10-19 18:38:44 -07:00
Timothy Kassis	f3bee71890	Add ClinVar	2025-10-19 18:31:14 -07:00
Timothy Kassis	e5afb5f4ba	Add COSMIC database	2025-10-19 18:22:29 -07:00
Timothy Kassis	68468a42c9	Add Document skills	2025-10-19 18:14:01 -07:00
Timothy Kassis	0bdbd2b7e8	Add Kegg	2025-10-19 18:09:12 -07:00
Timothy Kassis	4080bf907b	Add GEO	2025-10-19 17:14:11 -07:00
Timothy Kassis	f1317172bb	Add AlphaFold	2025-10-19 17:05:17 -07:00
Timothy Kassis	c627714209	Add EDA	2025-10-19 16:53:31 -07:00
Timothy Kassis	3b85528b90	Add the ZINC database	2025-10-19 16:39:56 -07:00
Timothy Kassis	3c07956326	Update README to include 'scientific-thinking' in installation instructions	2025-10-19 16:31:10 -07:00
Timothy Kassis	7fc594c981	Add PDB database	2025-10-19 16:28:40 -07:00
Timothy Kassis	031e44b8e5	Add NCBI Gene database	2025-10-19 16:21:40 -07:00
Timothy Kassis	68d095d796	Add ChEMBL database	2025-10-19 16:12:21 -07:00
Timothy Kassis	20dc0a2303	Update readme	2025-10-19 15:32:52 -07:00